SU 10


*original AA sequence:

UDELPNF-BPK00002B9 udelpnf-bpk00002b9 Length = 366 Frame = +2

LLRQAYSALFRRTSTFALTVVLGAVLFERAFDQGADAIFEHLNEGKLWKHIKHKYEASE



-----------------------------------------------------------------

Blast in Genebank:

>gi|12849267|dbj|AK012489.1|Musmusculus11daysembryowholebodycDNA,RIKENfull-length
enrichedlibrary,clone:2700065M04
product:ubiquinol--cytochrome-creductase(EC1.10.2.2)
7Kproteinhomolog[Bosprimigeniustaurus],fullinsert
sequence
Length=426

Score=98.6bits(244),Expect=2e-19
Identities=44/54(81%),Positives=49/54(90%)
Frame=+2
1ggcagtggcgcgagttcggcagtgaggcaacatgtcgtcgccgacgatcccttcgcgcct
61gtactccttgctgttccgcagaacttccacctttgccctcaccatcgcagtgggcgccct
121gttcttcgagcgagccttcgatcagggcgcagacgcgatctacgagcacatcaacgaggg
181gaaactgtggaaacatataaagcacaagtatgagaacaaggagtaacaccctgcccctgt
241gggacccgaaggaacagtcgccggtcagctgtttgcctggagttggggcctcagcctaag
301gatgagtttcaagttgccgttcaccgaccgccagtgtgtgggcaagctatggctccactg
361tacaaacagactcacttctgctgtgtttgagtacagctgtcagcaaataaatgcaaagtg
421ctcacg
ggcagtggcgcgagttcggcagtgaggcaacatgtcgtcgccgacgatcccttcgcgcct
gtactccttgctgttccgcagaacttccacctttgccctcaccatcgcagtgggcgccct
gttcttcgagcgagccttcgatcagggcgcagacgcgatctacgagcacatcaacgaggg
gaaactgtggaaacatataaagcacaagtatgagaacaaggagtaacaccctgcccctgt
gggacccgaaggaacagtcgccggtcagctgtttgcctggagttggggcctcagcctaag
gatgagtttcaagttgccgttcaccgaccgccagtgtgtgggcaagctatggctccactg
tacaaacagactcacttctgctgtgtttgagtacagctgtcagcaaataaatgcaaagtg
ctcacg

http://www.chickest.udel.edu/public_php/showResults.php?noblast=1&newSearch=1&seqName=pnf-b.pk0002.b9&library_id=0&chunksize=25&B1=Search&resultsPosition=0

>pnf-b.pk0002.b9  Length: 366
1
    GATGGCGCTG CTCCGGCAGG CGTACAGCGC GCTCTTCCGC CGCACCTCCA CTTTCGCCCT 
                                                                      60
  61
    CACCGTCGTG CTGGGCGCCG TGCTGTTCGA GCGCGCCTTC GATCAGGGCG CCGACGCCAT 
                                                                      120
 121
    CTTCGAGCAC CTCAACGAGG GGAAACTGTG GAAACACATC AAGCACAAAT ACGAGGCAAG 
                                                                      180
 181
    TGAAGAGTGA AATGCTCAGC AGCAAGATCC AGTCTGGGGT GGCAAAAGAC GCTGCAGAGA 
                                                                      240
 241
    AGGATTCAGT CTCCTGAAAC GGGTTGTNCT GAAATGGAAT TGGGTCCCTG ACTGAANCCG 
                                                                      300
 301
    AGCCAGANTT TTNNCAGCCA CCTTACGGAT NNGAGTNTCA CCAAAGNGGG NCCCAANANT 
                                                                      360
 361
  TTCGGC


GATGGCGCTG CTCCGGCAGG CGTACAGCGC GCTCTTCCGC CGCACCTCCA CTTTCGCCCT 
CACCGTCGTG CTGGGCGCCG TGCTGTTCGA GCGCGCCTTC GATCAGGGCG CCGACGCCAT 
CTTCGAGCAC CTCAACGAGG GGAAACTGTG GAAACACATC AAGCACAAAT ACGAGGCAAG 
TGAAGAGTGA AATGCTCAGC AGCAAGATCC AGTCTGGGGT GGCAAAAGAC GCTGCAGAGA 
AGGATTCAGT CTCCTGAAAC GGGTTGTNCT GAAATGGAAT TGGGTCCCTG ACTGAANCCG 
AGCCAGANTT TTNNCAGCCA CCTTACGGAT NNGAGTNTCA CCAAAGNGGG NCCCAANANT 
TTCGGC


Frame  1 
MALLRQAYSALFRRTSTFALTVVLGAVLFERAFDQGADAIFEHLNEGKLWKHIKHKYEAS
EE0NAQQQDPVWGGKRRCREGFSLLKRVXLKWNWVPD0XRARXXXATLRXXXSPKXXPXX
S


http://www.chick.umist.ac.uk/cgi-bin/chicken_database.cgi?show_seq=604160086F1
>604160086F1 cloneID='ChEST1014k22'
AGATGGCGCTGCTCCGGCAGGCGTACAGCGCGCTCTTCCGCCGCACCTCCACTTTCGCCC
TCACCGTCGTGCTGGGCGCCGTGCTGTTCGAGCGCGCCTTCGATCAGGGCGCCGACGCCA
TCTTCGAGCACCTCAACGAGGGGAAACTGTGGAAACACATCAAGCACAAATACGAGGCAA
GTGAAGAGTGAAATGCTCAGCAGCAAGATCCAGTCTGGGGTGGCAAAAGACACTGCAGAG
AAGGATTCAGTCTCCTGAAACGGGTTGTACTGAAATGGAATTGGGTCCCTGACTGACTCC
GAGCCAGATTATATCAGCCACCTACTGATATGATGTCAACCAAGATGGACTCAACGAGTT
CTGCTGCTGTACTGAAACTTACTGTGTTCCAATAAAAAAAAAACATTCTTCAAAAA

http://www.chick.umist.ac.uk/cgi-bin/chicken_database.cgi?show_seq=603802382F1
>603802382F1 cloneID='ChEST775d21'
GGCGCTTCCAAGATGGCGCTGCTCCGGCAGGCGTACAGCGCGCTCTTCCGCCGCACCTCC
ACTTTCGCCCTCACCGTCGTGCTGGGCGCCGTGCTGTTCGAGCGCGCCTTCGATCAGGGC
GCCGACGCCATCTTCGAGCACCTCAACGAGGGGAAACTGTGGAAACACATCAAGCACAAA
TACGAGGCAAGTGAAGAGTGAAATGCTCAGCAGCAAGATCCAGTCTGGGGTGGCAAAAGA
CACTGCAGAGAAGGATTCAGTCTCCTGAAACGGGTTGTACTGAAATGGAATTGGGTCCCT
GACTGACTCCGAGCCAGATTATATCAGCCACCTACTGATATGATGTCAACCAAGATGGAC
TCAACGAGTTCTGCTGCTGTACTGAAACTTACTGTGTTCCAATAAAAAAAACCATCCTCG
AAAAA

http://www.chick.umist.ac.uk/cgi-bin/chicken_database.cgi?show_seq=603742535F1
>603742535F1 cloneID='ChEST642e10'
AGATGGCGCTGCTCCGGCAGGCGTACAGCGCGCTCTTCCGCCGCACCTCCACTTTCGCCC
TCACCGTCGTGCTGGGCGCCGTGCTGTTCGAGCGCGCCTTCGATCAGGGCGCCGACGCCA
TCTTCGAGCACCTCAACGAGGGGAAACCGTGGAAACACATCAAGCACAAATACGAGGCAA
GTGAAGAGTGAAATGCTCAGCAGCAAGATCCAGTCTGGGGTGGCAAAAGACACTGCAGAG
AAGGATTCAGTCTCCTGAAACGGGTTGTACTGAAATGGAATTGGGTCCCTGACTGACTCC
GAGCCAGATTATATCAGCCACCTACTGATATGATGTCAACCAAGATGGACTCAACGAGTT
CTGCTGCTGTACTGAAACTTACTGTGTTCCAATAAAAAAACCCATTCCCGTAAAAA

http://www.chick.umist.ac.uk/cgi-bin/chicken_database.cgi?show_seq=604147186F1
>604147186F1 cloneID='ChEST989k21'
CCTCCGGCAGGCGTACAGCGCGCTCTTCCGCCGCACCTCCACTTTCGCCCTCACCGTCGT
GCTGGGCGCCGTGCTGTTCGAGCGCGCCTTCGATCAGGGCGCCGACGCCATCTTCGAGCA
CCTCAACGAGGGGAAACTGTGGAAACACATCAAGCACAAATACGAGGCAAGTGAAGAGTG
AAATGCTCAGCAGCAAGATCCAGTCTGGGGTGGCAAAAGACACTGCAGAGAAGGATTCAG
TCTCCTGAAACGGGTTGTACTGAAATGGAATTGGGTCCCTGACTGACTCCGAGCCAGATT
ATATCAGCCACCTACTGATATGATGTCAACCAAGATGGACTCAACGAGTTCTGCTGCTGT
ACTGAAACTTACTGTGTTCCAATAAAAAAACCCATTCCTGAAAAA

http://www.chick.umist.ac.uk/cgi-bin/chicken_database.cgi?show_seq=603405890F1
>603405890F1 cloneID='ChEST310c24'
CCGGCAGGCGTACAGCGCGCTCTTCCGCCGCACCTCCACTTTCGCCCTCACCGTCGTGCT
GGGCGCCGTGCTGTTCGAGCGCGCCTTCGATCAGGGCGCCGACGCCATCTTCGAGCACCT
CAACGAGGGGAAACTGTGGAAACACATCAAGCACAAATACGAGGCAAGTGAAGAGTGAAA
TGCTCAGCAGCAAGATCCAGTCTGGGGTGGCAAAAGACACTGCAGAGAAGGATTCAGTCT
CCTGAAACGGGTTGTACTGAAATGGAATTGGGTCCCTGACTGACTCCGAGCCAGATTATA
TCAGCCACCTACTGATATGATGTCAACCAAGATGGACTCAACGAGTTCTGCTGCTGTACT
GAAACTTACTGTGTTCCAATAAAAAAAACCATTCTCCAAAAA

http://www.chick.umist.ac.uk/cgi-bin/chicken_database.cgi?show_seq=604156339F1
>604156339F1 cloneID='ChEST1005m9'
GCTCCGGCAGGCGTACAGCGCGCTCTTCCGCCGCACCTCCACTTTCGCCCTCACCGTCGT
GCTGGGCGCCGTGCTGTTCGAGCGCGCCTTCGATCAGGGCGCCGACGCCATCTTCGAGCA
CCTCAACGAGGGGAAACTGTGGAAACACATCAAGCACAAATACGAGGCAAGTGAAGAGTG
AAATGCTCAGCAGCAAGATCCAGTCTGGGGTGGCAAAAGATACTGCAGAGAAGGATTCAG
TCTCCTGAAACGGGTTGTACTGAAATGGAATTGGGTCCCTGACTGACTCCGAGCCAGATT
ATATCAGCCACCTACTGATATGATGTCAACCAAGATGGACTCAACGAGTTCTGCTGCTGT
ACTGAAACTTACTGTGTTCCAATAAAAAAAAAACACTCTCAAAAA

http://www.chick.umist.ac.uk/cgi-bin/chicken_database.cgi?show_seq=603208289F1
>603208289F1 cloneID='ChEST183a24'
ATCCGGCAGGCGTACAGCGCGCTCTTCCGCCGCACCTCCACTTTCGCCCTCACCGTCGTG
CTGGGCGCCGTGCTGTTCGAGCGCGCCTTCGATCAGGCCGCCGACGCCATCTTCGAGCAC
CTCAACGAGGGGAAACTGTGGAAACACATCAAGCACAAATACGAGGCAAGTGAAGAGTGA
AATGCTCAGCAGCAAGATCCAGTCTGGGGTGGCAAAAGACACTGCAGAGAAGGATTCAGT
CTCCTGAAACGGGTTGTACTGAAATGGAATTGGGTCCCTGACTGACTCCGAGCCAGATTA
TATCAGCCACCTACTGATATGATGTCAACCAAGATGGACTCAACGAGTTCTGCTGCTGTA
CTGAAACTTACTGTGTTCCAATAAAAAAAACCATCCCTGAAAAA

http://www.chick.umist.ac.uk/cgi-bin/chicken_database.cgi?show_seq=603157981F1
>603157981F1 cloneID='ChEST175a21'
TCTGCTCCGGCAGGCGTCAGCGCGCTCTTCCGCCGCACCTCCACTTTCGCCCTCACCGTC
GTGCTGGGCGCCGTGCTGTTCGAGCGCGCCTTCGATCAGGGCGCCGACGCCATCTTCGAG
CACCTCAACGAGGGGAAACTGTGGAAACACATCAAGCACAAATACGAGGCAAGTGAAGAG
TGAAATGCTCAGCAGCAAGATCCAGTCTGGGGTGGCAAAAGACACTGCAGAGAAGGATTC
AGTCTCCTGAAACGGGTTGTACTGAAATGGAATTGGGTCCCTGACTGACTCCGAGCCAGA
TTATATCAGCCACCTACTGATATGATGTCAACCAAGATGGACTCAACGAGTTCTGCTGCT
GTACTGAAACTTACTGTGTTCCAATAAAAAAACCCATTCTGGAAAAA

http://www.chick.umist.ac.uk/cgi-bin/chicken_database.cgi?show_seq=603577656F1
>603577656F1 cloneID='ChEST529o14'
GCGCTTCCAAGATGGCGCTGCTCCGGCAGGCGTACAGCGCGCTCTTCCGCCGCACCTCCA
CTTTCGCCCTCACCGTCGTGCTGGGCGCCGTGCTGTTCGAGCGCGCCTTCGATCAGGGCG
CCGACGCCATCTTCGAGCACCTCAACGAGGGGAAACTGTGGAAACACATCAAGCACAAAT
ACGAGGCAAGTGAAGAGTGAAATGCTCAGCAGCAAGATCCAGTCTGGGGTGGCAAAAGAC
ACTGCAGAGAAGGATTCAGTCTCCTGAAACGGGTTGTACTGAAAGTGGAATGGGGTCCCT
GACGTGACTCCGAGCCAGATTATATCAGCCACCTACTGATATGATGTCAACCAAGATGGA
CTCAACGAGTTCTGCTGCTGTACTGAAACTTACTGTGTTCCAATAAAAAAACCCACCCTT
AAAAA

http://www.chick.umist.ac.uk/cgi-bin/chicken_database.cgi?show_seq=603210295F1
>603210295F1 cloneID='ChEST188m24'
GGAAACTGTGGAAACACATCAAGCACAAATACGAGGCAAGTGAAGAGTGAAATGCTCAGC
AGCAAGATCCAGTCTGGGGTGGCAAAAGACACTGCAGAGAAGGATTCAGTCTCCTGAAAC
GGGTTGTACTGAAATGGAATTGGGTCCCTGACTGACTCCGAGCCAGATTATATCAGCCAC
CTACTGATATGATGTCAACCAAGATGGACTCAACGAGTTCTGCTGCTGTACTGAAACTTA
CTGTGTTCCAATAAAAAAACCCATTCCTGAAAAAAAAAAAAACAAAAAACTCTAGTCGCG
ATCTAGAACA

----------------------------------------------------------

*Nucleotide alignment: see html file
---------------------------------------------------------


>604160086F1 cloneID='ChEST1014k22'
Frame  2 
MALLRQAYSALFRRTSTFALTVVLGAVLFERAFDQGADAIFEHLNEGKLWKHIKHKYEAS
EE0NAQQQDPVWGGKRHCREGFSLLKRVVLKWNWVPD0LRARLYQPPTDMMSTKMDSTSS
AAVLKLTVFQ0KKNILQK


>603802382F1 cloneID='ChEST775d21'
Frame  0 
GASKMALLRQAYSALFRRTSTFALTVVLGAVLFERAFDQGADAIFEHLNEGKLWKHIKHK
YEASEE0NAQQQDPVWGGKRHCREGFSLLKRVVLKWNWVPD0LRARLYQPPTDMMSTKMD
STSSAAVLKLTVFQ0KKPSSK

>603742535F1 cloneID='ChEST642e10'
Frame  2 
MALLRQAYSALFRRTSTFALTVVLGAVLFERAFDQGADAIFEHLNEGKPWKHIKHKYEAS
EE0NAQQQDPVWGGKRHCREGFSLLKRVVLKWNWVPD0LRARLYQPPTDMMSTKMDSTSS
AAVLKLTVFQ0KNPFP0K

>604147186F1 cloneID='ChEST989k21'
Frame  1 
LRQAYSALFRRTSTFALTVVLGAVLFERAFDQGADAIFEHLNEGKLWKHIKHKYEASEE0
NAQQQDPVWGGKRHCREGFSLLKRVVLKWNWVPD0LRARLYQPPTDMMSTKMDSTSSAAV
LKLTVFQ0KNPFLK

>603405890F1 cloneID='ChEST310c24'
Frame  1 
RQAYSALFRRTSTFALTVVLGAVLFERAFDQGADAIFEHLNEGKLWKHIKHKYEASEE0N
AQQQDPVWGGKRHCREGFSLLKRVVLKWNWVPD0LRARLYQPPTDMMSTKMDSTSSAAVL
KLTVFQ0KKPFSK

>604156339F1 cloneID='ChEST1005m9'
Frame  1 
LRQAYSALFRRTSTFALTVVLGAVLFERAFDQGADAIFEHLNEGKLWKHIKHKYEASEE0
NAQQQDPVWGGKRYCREGFSLLKRVVLKWNWVPD0LRARLYQPPTDMMSTKMDSTSSAAV
LKLTVFQ0KKNTLK

>603208289F1 cloneID='ChEST183a24'
Frame  0 
IRQAYSALFRRTSTFALTVVLGAVLFERAFDQAADAIFEHLNEGKLWKHIKHKYEASEE0
NAQQQDPVWGGKRHCREGFSLLKRVVLKWNWVPD0LRARLYQPPTDMMSTKMDSTSSAAV
LKLTVFQ0KKPSLK

>603157981F1 cloneID='ChEST175a21'
Frame  0 
SAPAGVSALFRRTSTFALTVVLGAVLFERAFDQGADAIFEHLNEGKLWKHIKHKYEASEE
0NAQQQDPVWGGKRHCREGFSLLKRVVLKWNWVPD0LRARLYQPPTDMMSTKMDSTSSAA
VLKLTVFQ0KNPFWK

>603577656F1 cloneID='ChEST529o14'
Frame  2 
ASKMALLRQAYSALFRRTSTFALTVVLGAVLFERAFDQGADAIFEHLNEGKLWKHIKHKY
EASEE0NAQQQDPVWGGKRHCREGFSLLKRVVLKVEWGP0RDSEPDYISHLLI0CQPRWT
QRVLLLY0NLLCSNKKTHP0K

>603210295F1 cloneID='ChEST188m24'
Frame  2 
KLWKHIKHKYEASEE0NAQQQDPVWGGKRHCREGFSLLKRVVLKWNWVPD0LRARLYQPP
TDMMSTKMDSTSSAAVLKLTVFQ0KNPFLKKKKTKNSSRDLE