Complex II at the PDB, and links to structure analysis servers

PDBID DATE RESOL # Reflns R Rfree TITLE header PDBsum procheck sfcheck EDS DSSP Dicarb site Q site K site Notes
1NEK 11-DEC-02 2.60 53727 0.247 0.289 COMPLEX II (SUCCINATE DEHYDROGENASE) FROM E. COLI WITH UBIQUINONE BOUND header PDBsum procheck sfcheck EDS DSSP OAA Q CA
1NEN 11-DEC-02 2.90 41793 0.271 0.296 COMPLEX II (SUCCINATE DEHYDROGENASE) FROM E. COLI WITH DINITROPHENOL-17 INHIBITOR CO-CRYSTALLIZED AT THE UBIQUINONE BINDING SITE header PDBsum procheck sfcheck EDS DSSP OAA DNP-17 CA
1YQ3 01-FEB-05 2.20 78719 0.175 0.223 AVIAN RESPIRATORY COMPLEX II WITH OXALOACETATE AND UBIQUINONE header PDBsum procheck sfcheck EDS DSSP TEO Q Water
1YQ4 01-FEB-05 2.33 68868 0.202 0.252 AVIAN RESPIRATORY COMPLEX II WITH 3-NITROPROPIONATE AND UBIQUINONE header PDBsum procheck sfcheck EDS DSSP 3-NP ad. Q Water
1ZOY 15-MAY-05 2.40 56559 0.213 0.259 CRYSTAL STRUCTURE OF MITOCHONDRIAL RESPIRATORY COMPLEX II FROM PORCINE HEART AT 2.4 ANGSTROMS header PDBsum procheck sfcheck EDS DSSP Empty Q Water
1ZP0 16-MAY-05 3.50 20010 0.268 0.293 CRYSTAL STRUCTURE OF MITOCHONDRIAL RESPIRATORY COMPLEX II BOUND WITH 3-NITROPROPIONATE AND 2-THENOYLTRIFLUOROACETONE header PDBsum procheck sfcheck EDS DSSP 3-NP TTFA water
2ACZ 19-JUL-05 3.10 34114 0.264 0.308 COMPLEX II (SUCCINATE DEHYDROGENASE) FROM E. COLI WITH ATPENIN A5 INHIBITOR CO-CRYSTALLIZED AT THE UBIQUINONE BINDING SITE header PDBsum procheck sfcheck EDS DSSP OAA AA5 -
2FBW 10-DEC-05 2.10 162208 0.187 0.227 AVIAN RESPIRATORY COMPLEX II WITH CARBOXIN BOUND header PDBsum procheck sfcheck EDS DSSP TEO CBE K
2H88 06-JUN-06 1.74 291095 0.178 0.206 AVIAN MITOCHONDRIAL RESPIRATORY COMPLEX II AT 1.8 ANGSTROM RESOLUTION header PDBsum procheck sfcheck EDS DSSP TEO waters K
2H89 06-JUN-06 2.40 59635 0.226 0.279 AVIAN RESPIRATORY COMPLEX II WITH MALONATE BOUND header PDBsum procheck sfcheck EDS DSSP MLI waters K
2WDQ 25-MAR-09 2.40 158494 0.171 0.200 E. COLI SUCCINATE:QUINONE OXIDOREDUCTASE (SQR) WITH CARBOXIN BOUND header PDBsum procheck sfcheck EDS DSSP TEO CBE Na
2WDR 25-MAR-09 3.20 71558 0.197 0.228 E. COLI SUCCINATE:QUINONE OXIDOREDUCTASE (SQR) WITH PENTACHLOROPHENOL BOUND header PDBsum procheck sfcheck EDS DSSP TEO PCI Na
2WDV 26-MAR-09 3.20 71862 0.205 0.233 E. COLI SUCCINATE:QUINONE OXIDOREDUCTASE (SQR) WITH AN EMPTY QUINONE-BINDING POCKET header PDBsum procheck sfcheck EDS DSSP TEO empty Na
2WP9 03-AUG-09 2.70 116577 0.19032 0.22247 CRYSTAL STRUCTURE OF THE E. COLI SUCCINATE:QUINONE OXIDOREDUCTASE (SQR) SDHB HIS207THR MUTANT header PDBsum procheck sfcheck EDS DSSP TEO CBE Na
2WQY 27-AUG-09 2.10 154202 0.18395 0.22283 REMODELLING OF CARBOXIN BINDING TO THE Q-SITE OF AVIAN RESPIRATORY COMPLEX II header PDBsum procheck sfcheck EDS DSSP OAA! CBE K
2WS3 03-SEP-09 3.2 71105 0.21870 0.25271 CRYSTAL STRUCTURE OF THE E. COLI SUCCINATE:QUINONE OXIDOREDUCTASE (SQR) SDHD TYR83PHE MUTANT header PDBsum procheck sfcheck EDS DSSP TEO CBE Na Putative quinone ligand
2WU2 28-SEP-09 2.50 146098 0.17689 0.21431 CRYSTAL STRUCTURE OF THE E. COLI SUCCINATE:QUINONE OXIDOREDUCTASE (SQR) SDHC HIS84MET MUTANT header PDBsum procheck sfcheck EDS DSSP TEO CBE Na Heme ligand
2WU5 29-SEP-09 2.803 106952 0.2134 0.2515 CRYSTAL STRUCTURE OF THE E. COLI SUCCINATE:QUINONE OXIDOREDUCTASE (SQR) SDHD HIS71MET MUTANT header PDBsum procheck sfcheck EDS DSSP TEO CBE Na Heme ligand
3ABV 22-DEC-09 3.24 28950 0.203 0.253 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH N-BIPHENYL-3-YL-2-TRIFLUOROMETHYL-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
3AE1 04-FEB-10 3.14 30472 0.220 0.268 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH N-PHENYL-2-(TRIFLUOROMETHYL)-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
3AE2 04-FEB-10 3.10 33385 0.204 0.248 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH 2-HYDROXY-N-PHENYL-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
3AE3 04-FEB-10 3.35 22686 0.214 0.261 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH 2-NITRO-N-PHENYL-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP empty (title cpd) (-)
3AE4 04-FEB-10 2.91 33975 0.222 0.257 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH 2-IODO-N-METHYL-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (?s ed)
3AE5 04-FEB-10 3.41 18899 0.228 0.278 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH 2-METHYL-N-(3-ISOPROPOXY-PHENYL)-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
3AE6 04-FEB-10 3.40 24598 0.250 0.299 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH N-(3-ISOPROPOXY-PHENYL)-PHTHALAMICACID header PDBsum procheck sfcheck EDS DSSP empty (title cpd) (-)
3AE7 04-FEB-10 3.62 20118 0.256 0.305 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH 2-IODO-N-(3-ISOPROPOXY-PHENYL)-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP empty (title cpd) (-)
3AE8 04-FEB-10 3.40 21173 0.239 0.288 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH N-(3-ISOPROPOXY-PHENYL)-2-TRIFLUOROMETHYLBENZAMIDE header PDBsum procheck sfcheck EDS DSSP empty Fluto (-)
3AE9 04-FEB-10 3.31 27275 0.257 0.307 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH N-(3-PENTAFLUOROPHENYLOXY-PHENYL)-2-TRIFLUOROMETHYL-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
3AEA 04-FEB-10 3.39 25081 0.236 0.286 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH N-(3-DIMETHYLAMINOMETHYL-PHENYL)-2-TRIFLUOROMETHYL-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
3AEB 04-FEB-10 3.00 33632 0.215 0.257 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH N-(3-PHENOXY-PHENYL)-2-TRIFLUOROMETHYL-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
3AEC 04-FEB-10 3.61 20635 0.245 0.294 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH 2-IODO-N-(1-METHYLETHYL)-BENZAMID header PDBsum procheck sfcheck EDS DSSP empty (title cpd) (-)
3AED 04-FEB-10 3.52 22600 0.224 0.269 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH 2-IODO-N-PHENYL-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
3AEE 04-FEB-10 3.22 27888 0.232 0.282 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH ATPENIN A5 header PDBsum procheck sfcheck EDS DSSP empty AA5 (-)
3AEF 04-FEB-10 2.80 33773 0.202 0.251 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II WITH AN EMPTY QUINONE-BINDING POCKET header PDBsum procheck sfcheck EDS DSSP 1 water empty (-)
3AEG 04-FEB-10 3.27 22368 0.244 0.312 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH N-BIPHENYL-3-YL-2-IODO-BENZAMIDE header PDBsum procheck sfcheck EDS DSSP empty (title cpd) (-)
3SFD 13-JUN-11 2.61 38294 0.242 0.286 CRYSTAL STRUCTURE OF PORCINE MITOCHONDRIAL RESPIRATORY COMPLEX II BOUND WITH OXALOACETATE AND PENTACHLOROPHENOL header PDBsum procheck sfcheck EDS DSSP OAA PCI (-) Highest porcine resol after 1ZOY, 2.61A
3SFE 13-JUN-11 2.81 32353 0.214 0.270 CRYSTAL STRUCTURE OF PORCINE MITOCHONDRIAL RESPIRATORY COMPLEX II BOUND WITH OXALOACETATE AND THIABENDAZOLE header PDBsum procheck sfcheck EDS DSSP OAA (title cpd) (-)
4YTP 18-MAR-15 3.10 25461 0.206 0.269 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH N-[(4-TERT-BUTYLPHENYL)METHYL]-2-(TRIFLUOROMETHYL)BENZAMIDE header PDBsum procheck sfcheck EDS DSSP empty (title cpd) (-) Empty dicarb site
4YXD 23-MAR-15 3.00 33058 0.206 0.258 CRYSTAL STRUCTURE OF PORCINE HEART MITOCHONDRIAL COMPLEX II BOUND WITH FLUTOLANIL header PDBsum procheck sfcheck EDS DSSP empty Fluto (-) Empty dicarb site
Ascaris RQFR:
3VR8 07-APR-12 2.81 76011 0.231 0.297 MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM THE PARASITIC NEMATODE ASCARIS SUUM header PDBsum procheck sfcheck EDS DSSP MLI RhodoQ (-)
3VR9 07-APR-12 3.01 65024 0.216 0.277 MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM THE PARASITIC NEMATODE ASCARIS SUUM WITH THE SPECIFIC INHIBITOR FLUTOLANIL header PDBsum procheck sfcheck EDS DSSP MLI Fluto (-)
3VRA 07-APR-12 3.44 41132 0.205 0.281 MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM THE PARASITIC NEMATODE ASCARIS SUUM WITH THE SPECIFIC INHIBITOR ATPENIN A5 header PDBsum procheck sfcheck EDS DSSP MLI AA5 (-)
3VRB 07-APR-12 2.91 56737 0.204 0.272 MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM THE PARASITIC NEMATODE ASCARIS SUUM WITH THE SPECIFIC INHIBITOR FLUTOLANIL AND SUBSTRATE FUMARATE header PDBsum procheck sfcheck EDS DSSP FUM Fluto (-)
4YSX 17-MAR-15 2.25 152442 0.181 0.221 CRYSTAL STRUCTURE OF MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM ASCARIS SUUM WITH THE SPECIFIC INHIBITOR NN23 header PDBsum procheck sfcheck EDS DSSP MLI nn23 water weak High Resolution RQFR
4YSY 17-MAR-15 3.10 58730 0.183 0.238 CRYSTAL STRUCTURE OF MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM ASCARIS SUUM WITH N-[(2,4-DICHLOROPHENYL)METHYL]-2-(TRIFLUOROMETHYL) BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
4YSZ 17-MAR-15 3.30 48822 0.179 0.250 CRYSTAL STRUCTURE OF MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM ASCARIS SUUM WITH 2-IODO-N-[3-(1-METHYLETHOXY)PHENYL]BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
4YT0 17-MAR-15 3.66 31772 0.193 0.262 CRYSTAL STRUCTURE OF MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM ASCARIS SUUM WITH 2-METHYL-N-[3-(1-METHYLETHOXY)PHENYL]BENZAMIDE. header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
4YTM 18-MAR-15 3.40 43572 0.178 0.245 CRYSTAL STRUCTURE OF MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM ASCARIS SUUM WITH N-BIPHENYL-3-YL-2-(TRIFLUOROMETHYL)BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
4YTN 18-MAR-15 3.00 61648 0.190 0.236 CRYSTAL STRUCTURE OF MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM ASCARIS SUUM WITH N-[3-(PENTAFLUOROPHENOXY)PHENYL]-2- (TRIFLUOROMETHYL)BENZAMIDE header PDBsum procheck sfcheck EDS DSSP MLI (title cpd) (-)
5C2T 16-JUN-15 2.75 78102 0.196 0.252 CRYSTAL STRUCTURE OF MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM ASCARIS SUUM WITH RHODOQUINONE-2 header PDBsum procheck sfcheck EDS DSSP MLI RQ-2 Water
5C3J 17-JUN-15 2.80 72671 0.202 0.260 CRYSTAL STRUCTURE OF MITOCHONDRIAL RHODOQUINOL-FUMARATE REDUCTASE FROM ASCARIS SUUM WITH UBIQUINONE-1 header PDBsum procheck sfcheck EDS DSSP MLI UQ-1 (-)